Eco-Economically Indispensable Borneo-Endemic Flora and Fauna: Proboscis Monkey (Nasalis larvatus), Malaysian Mahseer (Tor tambroides), Engkabang (Shorea macrophylla), Sarawak Rasbora (Rasbora sarawakensis) and Sago Palm (Metroxylon sagu)
The Borneo Island is the third-largest island and one of the greenest islands on earth. It is the natural habitat to various endemic flora and fauna such as the proboscis monkey (Nasalis larvatus), Malaysian mahseer (Tor tambroides), engkabang (Shorea macrophylla), Sarawak rasbora (Rasbora sarawakensis) and sago palm (Metroxylon sagu). In this mini review, we ventured into the current research, eco-economical aspects and potentials of each species and further provided future perspectives and recommendations to drive future research to greater heights besides supporting conservation endeavours.
Introduction
The Borneo Island is the third-largest island and one of the greenest islands on earth. It is the natural habitat to various endemic flora and fauna such as the proboscis monkey (Nasalis larvatus), Malaysian mahseer (Tor tambroides), engkabang (Shorea macrophylla), Sarawak rasbora (Rasbora sarawakensis) and sago palm (Metroxylon sagu). In this mini review, we ventured into the current research, eco-economical aspects and potentials of each species and further provided future perspectives and recommendations to drive future research to greater heights besides supporting conservation endeavours.
Proboscis Monkey (Nasalis larvatus)
The proboscis monkey is the most primitive colobine evidenced from its unique diploid number of 2n=2x=48 and its morphology [1, 2, 3]. What differs proboscis monkey from other primates are their high swimming capability, huge elongated nose, digestive physiology (they are foregut fermenter, unlike other primates), as well as four-chambered large stomachs [4]. In 2019, Lim, et al. [5] had isolated and characterised genome-wide putative liver-specific enhancers in this species. Interestingly, they discovered that some of the liver-specific transcription factors are highly responsible for the enhancer activity elevation (AP-1, C/EBP-β and HNF-1) and reduction (HNF-3β) [5]. These findings were deemed imperative as it serves as a stepping stone and important reference for future regenerative therapy and molecular treatments for humans [6], apart from establishing the proboscis monkey as one of the primate model organisms.
Malaysian Mahseer (Tor tambroides)
The Malaysian mahseer (or empurau) is food, ornamental and sport fish all-in-one, and its price is exorbitant due to its unique flesh taste and texture [7]. Wild empurau is much more expensive than their farmed counterparts as wild fishes feed on illipe nuts that are high in lipid content, thus the wild fish flesh has fruity sweetness. Majority of the empurau research focused on the growth performance and it was not until recently that the genetics and genomics of this fish are being explored thoroughly. Lim, et al. [8] improved the phylogenetic resolution of the Javan and Malaysian mahseers via mitogenomes sequencing, and they further identified several potential mitogenome markers useful for haplotype identification of empurau from unknown locations. Lau, et al. [9] sequenced the transcriptomes of the Javan and Malaysian mahseers not long after. Besides, Lau, et al, [7] explored the microbiome and metagenome of healthy and diseased empurau via 16S rRNA markers. Not long ago, Lau, et al. [9] sequenced, assembled and characterised the entire nuclear genome of this fish species. All in all, these data generated are essential for future evolutionary, taxonomy and conservation of this fish species.
Engkabang (Shorea macrophylla)
The engkabang is not only producing quality timber for the wood industry, but also producing lipid-filled nuts important for food and cosmetics manufacturing (as reviewed by Lim, in press). Kamaraudin, et al. [10] attempted to improve the fatty acid contents of farmed juvenile empurau fishes via illipe oil (engkabang fat) diets but failed, as juveniles fed with 0% illipe oil has the highest muscle n-3 and n-6 polyunsaturated fatty acid retention values [10]. Chew, et al. [11] had just recently sequenced the chloroplast genome of this tree species and further characterized the genome in terms of microsatellite, long repeat, structural features, comparative genomics, as well as phylogeny. Surprisingly, this tree species was found to cluster with Parashorea macrophylla, Parashorea chinenesis, Shorea leprosula, Shorea pachyphylla and Shorea macrophylla in a clade with bootstrap values exceeding 98% [11].
Sarawak Rasbora (Rasbora sarawakensis)
The Sarawak rasbora shared the same family (Cyprinidae) with the famous model organism, zebrafish. Lim, et al. [12] examined the phylogenetic and expression of ATP-binding cassette transporter genes in this fish species. They concluded that the Sarawak rasbora is one of the most feasible candidate as an alternative vertebrate model organism to complement future zebrafish researches. Aminan, et al. [13] further investigated the genetic relationship of this fish species with other rasbora from the same family via the combination of both morphometric and molecular tools. The cryptic diversity of rasbora fishes was greatly improved with the inclusion of molecular tools like genetic markers [3]. Later, Lim, et al. [14] sequenced and characterized the whole mitogenome of this fish species. They unravelled that the phylogenetic resolution has been improved with the availability of several newly sequenced mitogenomes of rasbora fishes from the same family, namely Rasbora tornieri, Rasbora hobelmani, Trigonopoma pauciperforatum, and Rasbora myersi [15, 16, 17, 18].
Sago Palm (Metroxylon sagu)
The sago palm is another all-in-one unique tree as it compacts its starch within its trunk and every organ of this tree can be utilized in various industries like food, polymer, bioprocess, microbiology, computational biology, genetics and genomics, population genetics as well as furniture manufacturing (as reviewed by Lim, et al. [19]. This tree is also widely deemed as the future tree of life and food security that can ease the global food hunger crisis, contributed by its high salt tolerance and disease resistance characteristics [20]. In 2020, Lim et al. [21] evaluated and documented the organellar genome copy number variations across different growth stages, organs, phenotypes and main localities in Sarawak, Malaysia. Not long after, Lim, et al. [22] sequenced and characterized the whole chloroplast genome of this tree species. In 2021, Lim, et al. [23] conducted a genome survey of sago palm before performing a hybrid genome assembly recently.
Future Perspectives and Conclusion
The future research of all the aforementioned eco- economical Borneo-endemic flora and fauna species is as limitless as the sky’s limit. For instance, the proboscis monkey can be further established as one of the most primitive primate model organism to facilitate the regenerative and personalized medical therapy in human. The culture of proboscis monkey organs in lab may be useful for organ replacement and transplantation in human in the near future. The Malaysian Mahseer, et al. research can be further elevated with the genome wide identification of growth and immune related genes (such as the ATP-binding cassette transporter genes, emulating that of Lim, et al. [24] on striped catfish) so that the growth of fish can be accelerated and shortened and at the same time diminishing the occurrence of diseases that can impact the fish farming industry profit. The future engkabang research can move forward with the investigation of which part of the fruit is consumed by the wild empurau fishes that had contributed towards the fruity sweetness in the fish flesh. To further improve the research advancement in Sarawak rasbora, some zebrafish related ecotoxicological and promoter mutational researches Yeaw, et al. [25, 26, 27, 28] can be emulated to discover their similarities and differences in terms of gene arrangement and toxic removal. The sago palm researches in the field of genomics can be further enriched with the sequencing of mitogenome that is known to be highly replicative and involves tedious assembly work. Besides, pest and virus related work emulating that of Jee, et al. [29], Lim, et al. [30] and Lim, et al. [31] is also as imperative as this could help planters to minimize profit loss of sago palm and engkabang. In short, the Borneo Island offers a myriad of rich resources yet to be explored fully. The flora and fauna species reviewed in this study is just the tip of the iceberg as we focused only on those that are research established and have eco-economical values [32, 33, 34, 35, 36]. It is hoped that these resources can be rightfully and completely geared towards their full potential with the right research initiatives without compromising the conservation endeavours.
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